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Performing multiple pattercounts from a value list/related table at once.


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Posted

Following on from this:-

http://fmforums.com/forum/showtopic.php?tid/217835/

I have a table containing several thousand DNA sequences (single strings of ATCG) and I want to search for the number of times any short string of ATCG occurs in the DNA. Thats all sorted for using pattercount.

Now though I want to create families of the search strings (containing maybe <50) and get the total number of pattercounts for the family.

The families can be in Value lists or as separate tables for each family it doesn't matter.

After some searching I tried:-

PatternCount(text;List(Family1::Searchstring)) where the search strings are in a related table but this doesn't work.

Thanks.

Posted

You could loop through each item in the family, performing a patterncount for each of them separately, and add up the total found count.

This topic is 5104 days old. Please don't post here. Open a new topic instead.

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